tree: 3e01dd0c40a72d386dfb7ecbe25fa789da848619 [path history] [tgz]
  1. ApE-2.0.7-r1
  2. GBrowse-2.48-r1
  3. aaindex-9.1
  4. abyss-1.3.3
  5. abyss-1.3.6-r1
  6. abyss-1.9.0-r1
  7. allpathslg-42337
  8. allpathslg-52488-r2
  9. amap-2.2-r2
  10. amos-3.1.0
  11. amos-3.1.0-r2
  12. arb-5.1-r1
  13. arb-5.2
  14. arb-5.3
  15. ariadne-1.3-r1
  16. ariadne-1.3-r2
  17. augustus-2.5.5
  18. bamtools-1.0.2-r1
  19. bamtools-2.3.0
  20. beast-mcmc-1.7.5-r1
  21. beast-mcmc-9999
  22. bedtools-2.26.0
  23. bfast-0.7.0a
  24. biogrep-1.0
  25. biogrep-1.0-r1
  26. biopandas-0.1.4
  27. bioperl-1.6.9
  28. bioperl-9999-r1
  29. bioperl-db-1.6.9
  30. bioperl-db-9999-r1
  31. bioperl-network-1.6.9
  32. bioperl-network-9999-r1
  33. bioperl-run-1.6.9
  34. bioperl-run-9999-r1
  35. biopython-1.65
  36. biopython-1.66
  37. biopython-1.68
  38. bioruby-1.4.3.0001-r1
  39. bioruby-9999
  40. biosql-1.0.1
  41. blat-34
  42. blat-34-r1
  43. blossoc-1.4.0
  44. bowtie-1.1.2
  45. bowtie-1.1.2-r1
  46. bowtie-2.2.6
  47. bowtie-2.2.9
  48. bwa-0.7.12
  49. bwa-0.7.15
  50. cd-hit-4.5.1
  51. cd-hit-4.5.4
  52. cd-hit-4.6
  53. clustal-omega-1.2.1
  54. clustal-omega-1.2.3
  55. clustalw-1.83-r3
  56. clustalw-2.1
  57. clustalw-mpi-0.13-r1
  58. clustalx-2.1-r1
  59. consed-19-r2
  60. consed-27
  61. cufflinks-2.2.1-r2
  62. cutg-160-r1
  63. dialign-tx-1.0.2-r1
  64. dialign2-2.2.1
  65. diya-1.0_rc4
  66. elph-0.1.5
  67. elph-1.0.1
  68. embassy-6.6.0
  69. embassy-cbstools-1.0.0.650
  70. embassy-clustalomega-1.1.0
  71. embassy-domainatrix-0.1.650
  72. embassy-domalign-0.1.650
  73. embassy-domsearch-0.1.650
  74. embassy-emnu-1.05.650-r1
  75. embassy-esim4-1.0.0.650
  76. embassy-hmmer-2.3.2.650
  77. embassy-iprscan-4.3.1.650
  78. embassy-meme-4.7.650
  79. embassy-mse-3.0.0.650
  80. embassy-phylipnew-3.69.650
  81. embassy-signature-0.1.650
  82. embassy-structure-0.1.650
  83. embassy-topo-2.0.650
  84. embassy-vienna-1.7.2.650
  85. emboss-6.6.0
  86. eugene-4.1
  87. eugene-4.1d
  88. exonerate-2.2.0-r1
  89. express-0.9.5
  90. express-0.9.5-r1
  91. express-1.5.1
  92. fasta-35.4.10
  93. fasta-36.3.5e
  94. fasttree-2.1.7
  95. fasttree-2.1.8
  96. finchtv-1.3.1-r2
  97. foldingathome-7.3.6-r2
  98. foldingathome-7.4.4
  99. gatk-2.4
  100. gatk-9999
  101. gibbs-3.1
  102. glimmer-3.02-r3
  103. glimmer-3.02b
  104. glimmerhmm-3.0.1-r1
  105. gmap-2011.10.07
  106. gmap-2012.07.20
  107. gmap-2015.12.31.5
  108. goby-1.9.7.3-r1
  109. goby-1.9.8.1-r1
  110. goby-cpp-1.9.7.3
  111. goby-cpp-1.9.8.1
  112. goby-cpp-2.0.1
  113. hmmer-2.3.2-r3
  114. hmmer-3.0
  115. iedera-1.04
  116. iedera-1.05-r1
  117. infernal-1.0.2-r1
  118. iqpnni-3.3.1
  119. iqpnni-3.3.2-r1
  120. kalign-2.03
  121. kalign-2.03-r1
  122. lagan-2.0-r3
  123. last-230
  124. last-299
  125. mafft-7.050
  126. mafft-7.215
  127. mafft-7.305
  128. mammoth-1.0-r1
  129. maq-0.7.1
  130. maq-0.7.1-r1
  131. maqview-0.2.5-r2
  132. mcl-08.312
  133. mcl-12.135
  134. mcl-14.137
  135. meme-4.8.1-r2
  136. mira-4.0.2
  137. mosaik-1.0.1367
  138. mosaik-1.0.1388
  139. mosaik-2.2.30
  140. mothur-1.27.0-r1
  141. mrbayes-3.1.2-r1
  142. mrbayes-3.1.2-r2
  143. mummer-3.20
  144. mummer-3.21
  145. mummer-3.22-r1
  146. muscle-3.8.31
  147. ncbi-tools-2.2.26-r2
  148. newick-utils-1.3.0
  149. newick-utils-1.5.0
  150. newick-utils-1.6
  151. njplot-2.3
  152. njplot-2.3-r1
  153. pals-1.0
  154. paml-4.4c-r1
  155. phrap-1.080812-r1
  156. phred-071220
  157. phylip-3.69-r1
  158. phylip-3.696-r1
  159. phyml-2.4.5-r2
  160. picard-1.103
  161. piler-1.0
  162. pilercr-1.0
  163. plink-1.07-r1
  164. plink-1.90_pre140514
  165. poa-2-r1
  166. prank-140603
  167. primer3-2.3.5
  168. primer3-2.3.6
  169. primer3-2.3.7
  170. prints-39.0
  171. probcons-1.12-r1
  172. prodigal-2.50
  173. prodigal-2.60
  174. profphd-1.0.39
  175. profphd-1.0.40
  176. prosite-19.36
  177. prosite-20.36
  178. prosite-20.52
  179. prosite-20.72
  180. psipred-3.1
  181. psipred-3.2
  182. psipred-3.2.1
  183. psipred-3.3
  184. psipred-3.4
  185. psipred-3.5
  186. pysam-0.9.0
  187. qrna-2.0.3c-r1
  188. raxml-7.2.6
  189. rebase-1602
  190. rebase-1604
  191. rebase-1607
  192. rebase-1608
  193. rebase-1609
  194. recon-1.06-r1
  195. recon-1.06-r2
  196. repeatmasker-4.0.1
  197. repeatmasker-libraries-20120418
  198. rmblast-1.2-r1
  199. rnaview-20040713
  200. rnaview-20040713-r2
  201. rnaview-20040713-r3
  202. samtools-0.1.12
  203. samtools-0.1.19-r2
  204. samtools-0.1.20-r2
  205. samtools-1.0
  206. samtools-1.0-r1
  207. samtools-1.1
  208. samtools-1.2
  209. samtools-1.3-r1
  210. seaview-4.3.5
  211. seaview-4.5.4
  212. seaview-4.6
  213. seqan-1.4.2-r1
  214. seqan-2.2.0
  215. shrimp-2.0.1
  216. shrimp-2.2.3
  217. sibsim4-0.20
  218. sim4-20030921
  219. sim4-20030921-r1
  220. snpfile-2.0.1
  221. snpfile-2.0.1-r1
  222. stride-20011129-r1
  223. t-coffee-11.00-r1
  224. t-coffee-9.03.1318-r1
  225. tophat-1.0.12
  226. tophat-2.1.1-r1
  227. transfac-3.2
  228. tree-puzzle-5.2
  229. treeviewx-0.5.1-r2
  230. treeviewx-0.5.1-r3
  231. trf-4.04
  232. trnascan-se-1.23-r2
  233. trnascan-se-1.31
  234. uchime-4.2.40
  235. ucsc-genome-browser-260
  236. unafold-3.8
  237. unafold-3.8-r1
  238. update-blastdb-12.0.0
  239. vaal-46233
  240. vaal-46233-r2
  241. vcftools-0.1.12b
  242. velvet-1.0.18-r1
  243. velvet-1.2.10
  244. vienna-rna-2.1.1
  245. vienna-rna-2.1.8
  246. wgs-assembler-5.4
  247. wgs-assembler-6.1
  248. wgs-assembler-7.0
  249. wgs-assembler-7.0-r1
  250. wise-2.4.0_alpha
  251. yass-1.14-r2