blob: 1f183a7675aa46a25f5693c86e14ca21b0b6f4f2 [file] [log] [blame]
# ChangeLog for sci-biology/hmmer
# Copyright 1999-2016 Gentoo Foundation; Distributed under the GPL v2
# (auto-generated from git log)
*hmmer-3.0 (09 Aug 2015)
*hmmer-2.3.2-r2 (09 Aug 2015)
*hmmer-2.3.2-r1 (09 Aug 2015)
09 Aug 2015; Robin H. Johnson <>
+files/hmmer-3.0-fix_tests.patch, +files/hmmer-3.0-perl-5.16-2.patch,
+hmmer-2.3.2-r1.ebuild, +hmmer-2.3.2-r2.ebuild, +hmmer-3.0.ebuild,
proj/gentoo: Initial commit
This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.
This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.
Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.
Signed-off-by: Robin H. Johnson <>
X-Thanks: Alec Warner <> - did the GSoC 2006 migration
X-Thanks: Robin H. Johnson <> - infra guy, herding this
X-Thanks: Nguyen Thai Ngoc Duy <> - Former Gentoo
developer, wrote Git features for the migration
X-Thanks: Brian Harring <> - wrote much python to improve
X-Thanks: Rich Freeman <> - validation scripts
X-Thanks: Patrick Lauer <> - Gentoo dev, running new 2014
work in migration
X-Thanks: Michał Górny <> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on
the bikeshed
24 Aug 2015; Justin Lecher <> metadata.xml:
Use https by default
Convert all URLs for sites supporting encrypted connections from http to
Signed-off-by: Justin Lecher <>
24 Aug 2015; Mike Gilbert <> metadata.xml:
Revert DOCTYPE SYSTEM https changes in metadata.xml
repoman does not yet accept the https version.
This partially reverts eaaface92ee81f30a6ac66fe7acbcc42c00dc450.
24 Jan 2016; Michał Górny <> metadata.xml:
Replace all herds with appropriate projects (GLEP 67)
Replace all uses of herd with appropriate project maintainers, or no
maintainers in case of herds requested to be disbanded.
24 Jan 2016; Michał Górny <> metadata.xml:
Set appropriate maintainer types in metadata.xml (GLEP 67)
*hmmer-2.3.2-r3 (19 Apr 2016)
19 Apr 2016; Ian Stakenvicius <> -hmmer-2.3.2-r1.ebuild,
-hmmer-2.3.2-r2.ebuild, +hmmer-2.3.2-r3.ebuild, metadata.xml:
cheamup of 2.3.2 version
* Bumped EAPI
* Merged KEYWORDS between 2.3.2-r1 and 2.3.2-r2
* dropped IUSE="pvm" as package was dropped 5 years ago
* fixed metadata.xml to match
Package-Manager: portage-2.2.26
*hmmer-3.1_beta2 (09 Oct 2016)
09 Oct 2016; David Seifert <>
+files/hmmer-3.1_beta2-fix-perl-shebangs.patch, +hmmer-3.1_beta2.ebuild:
Version bump to 3.1_beta2
* EAPI=6
* Make perl shebangs portable
* Install headers into 'hmmer3' subdir
Package-Manager: portage-2.3.1
*hmmer-2.3.2-r4 (09 Oct 2016)
09 Oct 2016; David Seifert <>
+files/hmmer-2.3.2-fix-perl-shebangs.patch, +hmmer-2.3.2-r4.ebuild:
Properly SLOT=2 hmmer-2.3.2
Gentoo-bug: 328911, 586960
* EAPI=6
* Introduce SLOT=2 and rename binaries and
static libraries
Package-Manager: portage-2.3.1