| # ChangeLog for sci-biology/vienna-rna |
| # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 |
| # $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.55 2014/11/16 20:29:21 dilfridge Exp $ |
| |
| 16 Nov 2014; Andreas K. Huettel <dilfridge@gentoo.org> |
| vienna-rna-2.1.1.ebuild, vienna-rna-2.1.8.ebuild: |
| Replace fixlocalpod with perl_delete_localpod |
| |
| *vienna-rna-2.1.8 (15 Sep 2014) |
| |
| 15 Sep 2014; Justin Lecher <jlec@gentoo.org> +vienna-rna-2.1.8.ebuild, |
| +files/vienna-rna-2.1.8-bindir.patch: |
| Version Bump, #522850 |
| |
| 29 Aug 2014; Mikle Kolyada <zlogene@gentoo.org> -vienna-rna-1.8.5.ebuild, |
| vienna-rna-2.1.1.ebuild: |
| ppc stable wrt bug #520776; Drop old. |
| |
| 29 Aug 2014; Sergey Popov <pinkbyte@gentoo.org> vienna-rna-2.1.1.ebuild: |
| Stable on amd64 and x86, wrt bug #520776 |
| |
| 29 Aug 2014; Sergey Popov <pinkbyte@gentoo.org> vienna-rna-2.1.1.ebuild: |
| QA: move AUTOTOOLS_IN_SOURCE_BUILD definition beforce inheriting autotools |
| eclass, drop obsolete python 2.6 support |
| |
| 06 Jan 2014; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild: |
| Punt base.eclass |
| |
| 05 Sep 2013; Michał Górny <mgorny@gentoo.org> vienna-rna-2.1.1.ebuild: |
| Clean up PYTHON_COMPAT from old implementations. |
| |
| 29 May 2013; Justin Lecher <jlec@gentoo.org> vienna-rna-2.1.1.ebuild: |
| Fix usage of new python r1 eclasses (missing PYTHON_REQUIRED_USE) |
| |
| *vienna-rna-2.1.1 (13 Feb 2013) |
| |
| 13 Feb 2013; Justin Lecher <jlec@gentoo.org> +vienna-rna-2.1.1.ebuild, |
| +files/vienna-rna-2.1.1-bindir.patch, |
| +files/vienna-rna-2.1.1-impl-decl.patch, +files/vienna-rna-2.1.1-prll.patch, |
| +files/vienna-rna-2.1.1-setup.py: |
| Version Bump; move to EAPI=5, new python eclasses; autotools-utils |
| |
| 31 Jan 2013; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild, |
| metadata.xml: |
| Only call distutils phase functions with USE=python, #422899 |
| |
| 10 Jul 2012; Justin Lecher <jlec@gentoo.org> -vienna-rna-1.8.4-r1.ebuild, |
| -vienna-rna-1.8.4-r2.ebuild, metadata.xml: |
| Cleaned old |
| |
| 10 Jul 2012; Brent Baude <ranger@gentoo.org> vienna-rna-1.8.5.ebuild: |
| Marking vienna-rna-1.8.5 ppc for bug 393867 |
| |
| 26 Feb 2012; Patrick Lauer <patrick@gentoo.org> vienna-rna-1.8.4-r1.ebuild, |
| vienna-rna-1.8.5.ebuild: |
| Restricting jython |
| |
| 21 Dec 2011; Pawel Hajdan jr <phajdan.jr@gentoo.org> vienna-rna-1.8.5.ebuild: |
| x86 stable wrt bug #393867 |
| |
| 16 Dec 2011; Agostino Sarubbo <ago@gentoo.org> vienna-rna-1.8.5.ebuild: |
| Stable for AMD64, wrt bug #393867 |
| |
| 16 Dec 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild: |
| Add missing dep on dev-lang/swig, #394933 |
| |
| 16 Dec 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild: |
| Handle static-libs |
| |
| 28 Jun 2011; Brent Baude <ranger@gentoo.org> vienna-rna-1.8.4-r1.ebuild: |
| Marking vienna-rna-1.8.4-r1 ppc for bug 325459 |
| |
| 03 May 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild, |
| +files/vienna-rna-1.8.5-setup.py: |
| Added python support, #365793 |
| |
| 20 Mar 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.4-r1.ebuild, |
| vienna-rna-1.8.4-r2.ebuild, vienna-rna-1.8.5.ebuild: |
| Install Perl modules into vendor-dir, #349772 |
| |
| *vienna-rna-1.8.5 (20 Mar 2011) |
| |
| 20 Mar 2011; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.4-r1.ebuild, |
| vienna-rna-1.8.4-r2.ebuild, +vienna-rna-1.8.5.ebuild: |
| Version Bump |
| |
| *vienna-rna-1.8.4-r2 (15 Oct 2010) |
| |
| 15 Oct 2010; Kacper Kowalik <xarthisius@gentoo.org> |
| -files/vienna-rna-1.7.2-disable-gd.patch, |
| -files/vienna-rna-1.7.2-gcc4.3.patch, |
| -files/vienna-rna-1.7.2-gcc4.4.patch, -vienna-rna-1.8.4.ebuild, |
| +vienna-rna-1.8.4-r2.ebuild, +files/vienna-rna-1.8.4-implicits.patch, |
| +files/vienna-rna-1.8.4-overflows.patch: |
| Fix buffer overflows wrt bug 341089. Thanks to Diego for the report. Fix |
| implicit function declarations. Drop old. |
| |
| 15 Jul 2010; Christian Faulhammer <fauli@gentoo.org> |
| vienna-rna-1.8.4-r1.ebuild: |
| stable x86, bug 325459 |
| |
| 26 Jun 2010; Christoph Mende <angelos@gentoo.org> |
| vienna-rna-1.8.4-r1.ebuild: |
| Stable on amd64 wrt bug #325459 |
| |
| *vienna-rna-1.8.4-r1 (25 Jun 2010) |
| |
| 25 Jun 2010; Justin Lecher <jlec@gentoo.org> -vienna-rna-1.7.2.ebuild, |
| -vienna-rna-1.8.3.ebuild, +vienna-rna-1.8.4-r1.ebuild, |
| +files/vienna-rna-1.8.4-bindir.patch: |
| Install ELFs in correct place, #300012 |
| |
| 03 Apr 2010; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.4.ebuild, |
| +files/vienna-rna-1.8.4-jobserver-fix.patch: |
| jobserver fix, #304117, thanks Myckel |
| |
| 09 Feb 2010; Pacho Ramos <pacho@gentoo.org> vienna-rna-1.8.4.ebuild: |
| amd64 stable, bug 298769 |
| |
| 29 Dec 2009; Christian Faulhammer <fauli@gentoo.org> |
| vienna-rna-1.8.4.ebuild: |
| stable x86, bug 298769 |
| |
| *vienna-rna-1.8.4 (13 Nov 2009) |
| |
| 13 Nov 2009; Andrey Kislyuk <weaver@gentoo.org> +vienna-rna-1.8.4.ebuild: |
| Version bump |
| |
| 02 Nov 2009; Markus Meier <maekke@gentoo.org> vienna-rna-1.8.3.ebuild: |
| amd64/x86 stable, bug #290926 |
| |
| 31 Oct 2009; Andrey Kislyuk <weaver@gentoo.org> vienna-rna-1.8.3.ebuild: |
| Fix linking failure on x86 |
| |
| 10 Sep 2009; Andrey Kislyuk <weaver@gentoo.org> vienna-rna-1.8.3.ebuild: |
| Fix gcc-4.4 patching, bug 284539 |
| |
| *vienna-rna-1.8.3 (10 Sep 2009) |
| |
| 10 Sep 2009; Andrey Kislyuk <weaver@gentoo.org> |
| +files/vienna-rna-1.8.3-gcc4.3.patch, +vienna-rna-1.8.3.ebuild: |
| Version bump and cleanup |
| |
| 30 Jul 2009; Samuli Suominen <ssuominen@gentoo.org> |
| vienna-rna-1.7.2.ebuild, +files/vienna-rna-1.7.2-gcc4.4.patch: |
| Fix building with GCC 4.4 and GLIBC 2.10+ wrt #274044. Rename getline to |
| v_getline. Missing include. |
| |
| 09 Oct 2008; Markus Dittrich <markusle@gentoo.org> |
| vienna-rna-1.7.2.ebuild: |
| Remove perlocal.pod file to avoid file collisions (see bug #240358). |
| |
| 06 Oct 2008; Markus Dittrich <markusle@gentoo.org> |
| +files/vienna-rna-1.7.2-LDFLAGS.patch, |
| +files/vienna-rna-1.7.2-disable-gd.patch, vienna-rna-1.7.2.ebuild: |
| Fixed ignored LDFLAGS issues and bogus detection of GD support. Also |
| enabled the tests that come with the package. |
| |
| *vienna-rna-1.7.2 (28 Aug 2008) |
| |
| 28 Aug 2008; Markus Dittrich <markusle@gentoo.org> |
| +files/vienna-rna-1.7.2-gcc4.3.patch, -vienna-rna-1.6.1.ebuild, |
| -vienna-rna-1.6.5.ebuild, +vienna-rna-1.7.2.ebuild: |
| Version bump and removed old ebuilds (fixes bug #235943). Thanks much to |
| Chad A. Simmons <chad.simmons@member.fsf.org> for his ebuild and patches. |
| |
| 06 Aug 2008; Ulrich Mueller <ulm@gentoo.org> metadata.xml: |
| Add USE flag description to metadata wrt GLEP 56. |
| |
| *vienna-rna-1.7.0 (01 May 2008) |
| |
| 01 May 2008; Markus Dittrich <markusle@gentoo.org> |
| +vienna-rna-1.7.0.ebuild: |
| Version bump. |
| |
| *vienna-rna-1.6.5 (24 Nov 2007) |
| |
| 24 Nov 2007; Markus Dittrich <markusle@gentoo.org> |
| +files/vienna-rna-1.6.5-c-fixes.patch, +vienna-rna-1.6.5.ebuild: |
| Version bump (fixes bug #191882). |
| |
| 29 Apr 2007; Jeff Gardner <je_fro@gentoo.org> vienna-rna-1.6.1.ebuild: |
| Adding ~amd64. |
| |
| 22 Feb 2007; Markus Ullmann <jokey@gentoo.org> ChangeLog: |
| Redigest for Manifest2 |
| |
| 03 Nov 2006; Olivier Fisette <ribosome@gentoo.org> -vienna-rna-1.6.ebuild: |
| Pruned old version. |
| |
| 14 Sep 2006; Olivier Fisette <ribosome@gentoo.org> metadata.xml: |
| Stepping down from maintaining this package. |
| |
| *vienna-rna-1.6.1 (14 Sep 2006) |
| |
| 14 Sep 2006; Olivier Fisette <ribosome@gentoo.org> |
| +vienna-rna-1.6.1.ebuild: |
| New upstream version. |
| |
| *vienna-rna-1.6 (03 Feb 2006) |
| |
| 03 Feb 2006; Olivier Fisette <ribosome@gentoo.org> |
| -vienna-rna-1.5_beta.ebuild, -vienna-rna-1.6_alpha.ebuild, |
| +vienna-rna-1.6.ebuild: |
| Removed alpha and beta versions. New version. Removed dependency on X11. |
| |
| *vienna-rna-1.6_alpha (19 Oct 2005) |
| |
| 19 Oct 2005; Olivier Fisette <ribosome@gentoo.org> |
| +vienna-rna-1.6_alpha.ebuild: |
| New version. |
| |
| 30 Aug 2005; Olivier Fisette <ribosome@gentoo.org> |
| vienna-rna-1.5_beta.ebuild: |
| Added to x86. |
| |
| 30 Jan 2005; Olivier Fisette <ribosome@gentoo.org> vienna-rna-1.4.ebuild: |
| Ebuild cleanup. |
| |
| *vienna-rna-1.5_beta (09 Jan 2005) |
| |
| 09 Jan 2005; Olivier Fisette <ribosome@gentoo.org> |
| +vienna-rna-1.5_beta.ebuild: |
| Added new beta release (hard-masked). |
| |
| *vienna-rna-1.4 (23 Dec 2004) |
| |
| 23 Dec 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml, |
| +vienna-rna-1.4.ebuild: |
| Moved from app-sci/vienna-rna to sci-biology/vienna-rna. |
| |
| 31 Oct 2004; Olivier Fisette <ribosome@gentoo.org> vienna-rna-1.4.ebuild: |
| Added to x86. |
| |
| 23 Jun 2004; David Holm <dholm@gentoo.org> vienna-rna-1.4.ebuild: |
| Added to ~ppc. |
| |
| *vienna-rna-1.4 (22 Jun 2004) |
| |
| 22 Jun 2004; Olivier Fisette <ribosome@gentoo.org> |
| vienna-rna-1.4.ebuild, metadata.xml : |
| Initial import. Ebuild submitted by Olivier Fisette <ribosome@gentoo.org>. |
| Reference: Gentoo Bugzilla, bug #53734 |
