tree: fc43bc76bbad515c284540338ce01f659e1ace58 [path history] [tgz]
  1. aaindex-9.1
  2. abyss-1.3.3
  3. abyss-1.3.6-r1
  4. allpathslg-42337
  5. allpathslg-52488-r1
  6. amap-2.2-r2
  7. amos-3.1.0
  8. amos-3.1.0-r1
  9. ApE-2.0.7-r1
  10. arb-5.1-r1
  11. arb-5.2
  12. arb-5.3
  13. ariadne-1.3-r1
  14. ariadne-1.3-r2
  15. augustus-2.5.5
  16. bamtools-1.0.2-r1
  17. bamtools-2.3.0
  18. beast-mcmc-1.7.5-r1
  19. beast-mcmc-9999
  20. bedtools-2.16.2
  21. bedtools-2.20.1
  22. bfast-0.7.0a
  23. biogrep-1.0
  24. biogrep-1.0-r1
  25. biopandas-0.1.4
  26. bioperl-1.6.9
  27. bioperl-9999-r1
  28. bioperl-db-1.6.9
  29. bioperl-db-9999-r1
  30. bioperl-network-1.6.9
  31. bioperl-network-9999-r1
  32. bioperl-run-1.6.9
  33. bioperl-run-9999-r1
  34. biopython-1.65
  35. biopython-1.66
  36. bioruby-1.4.3.0001-r1
  37. bioruby-9999
  38. biosql-1.0.1
  39. blat-34
  40. blat-34-r1
  41. blossoc-1.4.0
  42. bowtie-1.1.2
  43. bowtie-1.1.2-r1
  44. bowtie-2.2.6
  45. bowtie-2.2.9
  46. bwa-0.7.12
  47. bwa-0.7.13
  48. cd-hit-4.5.1
  49. cd-hit-4.5.4
  50. cd-hit-4.6
  51. clustal-omega-1.2.1
  52. clustalw-1.83-r3
  53. clustalw-2.1
  54. clustalw-mpi-0.13-r1
  55. clustalx-2.1-r1
  56. consed-19-r2
  57. consed-27
  58. cufflinks-2.2.1-r2
  59. cutg-160-r1
  60. dialign-tx-1.0.2-r1
  61. dialign2-2.2.1
  62. diya-1.0_rc4
  63. elph-0.1.5
  64. elph-1.0.1
  65. embassy-6.6.0
  66. embassy-cbstools-1.0.0.650
  67. embassy-clustalomega-1.1.0
  68. embassy-domainatrix-0.1.650
  69. embassy-domalign-0.1.650
  70. embassy-domsearch-0.1.650
  71. embassy-emnu-1.05.650-r1
  72. embassy-esim4-1.0.0.650
  73. embassy-hmmer-2.3.2.650
  74. embassy-iprscan-4.3.1.650
  75. embassy-meme-4.7.650
  76. embassy-mse-3.0.0.650
  77. embassy-phylipnew-3.69.650
  78. embassy-signature-0.1.650
  79. embassy-structure-0.1.650
  80. embassy-topo-2.0.650
  81. embassy-vienna-1.7.2.650
  82. emboss-6.6.0
  83. eugene-4.1
  84. exonerate-2.2.0-r1
  85. express-0.9.5
  86. express-0.9.5-r1
  87. express-1.5.1
  88. fasta-35.4.10
  89. fasta-36.3.5e
  90. fasttree-2.1.7
  91. fasttree-2.1.8
  92. finchtv-1.3.1-r2
  93. foldingathome-7.3.6-r2
  94. foldingathome-7.4.4
  95. gatk-2.4
  96. gatk-9999
  97. GBrowse-2.48-r1
  98. gibbs-3.1
  99. glimmer-3.02-r3
  100. glimmer-3.02b
  101. glimmerhmm-3.0.1-r1
  102. gmap-2011.10.07
  103. gmap-2012.07.20
  104. gmap-2015.12.31.5
  105. goby-1.9.7.3-r1
  106. goby-1.9.8.1-r1
  107. goby-cpp-1.9.7.3
  108. goby-cpp-1.9.8.1
  109. goby-cpp-2.0.1
  110. hmmer-2.3.2-r3
  111. hmmer-3.0
  112. iedera-1.04
  113. iedera-1.05-r1
  114. infernal-1.0.2-r1
  115. iqpnni-3.2
  116. iqpnni-3.3.1
  117. iqpnni-3.3.2
  118. kalign-2.03
  119. kalign-2.03-r1
  120. lagan-2.0-r1
  121. lagan-2.0-r2
  122. last-230
  123. last-299
  124. mafft-7.050
  125. mafft-7.215
  126. mammoth-1.0-r1
  127. maq-0.7.1
  128. maq-0.7.1-r1
  129. maqview-0.2.5-r2
  130. mcl-08.312
  131. mcl-12.135
  132. mcl-14.137
  133. meme-4.8.1-r2
  134. mira-4.0.2
  135. mosaik-1.0.1367
  136. mosaik-1.0.1388
  137. mothur-1.27.0-r1
  138. mrbayes-3.1.2-r1
  139. mrbayes-3.1.2-r2
  140. mummer-3.20
  141. mummer-3.21
  142. mummer-3.22-r1
  143. muscle-3.8.31
  144. ncbi-tools-2.2.26-r2
  145. newick-utils-1.3.0
  146. newick-utils-1.5.0
  147. newick-utils-1.6
  148. njplot-2.3
  149. njplot-2.3-r1
  150. pals-1.0
  151. paml-4.4c-r1
  152. phrap-1.080812-r1
  153. phred-071220
  154. phylip-3.69-r1
  155. phylip-3.696-r1
  156. phyml-2.4.5-r2
  157. picard-1.103
  158. piler-1.0
  159. pilercr-1.0
  160. plink-1.07-r1
  161. plink-1.90_pre140514
  162. poa-2-r1
  163. prank-100701
  164. prank-111130
  165. prank-140603
  166. primer3-2.3.5
  167. primer3-2.3.6
  168. primer3-2.3.7
  169. prints-39.0
  170. probcons-1.12-r1
  171. prodigal-2.50
  172. prodigal-2.60
  173. profphd-1.0.39
  174. profphd-1.0.40
  175. prosite-19.36
  176. prosite-20.36
  177. prosite-20.52
  178. prosite-20.72
  179. psipred-3.1
  180. psipred-3.2
  181. psipred-3.2.1
  182. psipred-3.3
  183. psipred-3.4
  184. psipred-3.5
  185. pysam-0.9.0
  186. qrna-2.0.3c-r1
  187. raxml-7.2.6
  188. rebase-1601
  189. rebase-1602
  190. rebase-1604
  191. recon-1.06-r1
  192. recon-1.06-r2
  193. repeatmasker-4.0.1
  194. repeatmasker-libraries-20120418
  195. rmblast-1.2-r1
  196. rnaview-20040713
  197. rnaview-20040713-r2
  198. rnaview-20040713-r3
  199. samtools-0.1.12
  200. samtools-0.1.19-r2
  201. samtools-0.1.20-r2
  202. samtools-1.0
  203. samtools-1.0-r1
  204. samtools-1.1
  205. samtools-1.2
  206. samtools-1.3-r1
  207. seaview-4.3.5
  208. seaview-4.5.4
  209. seqan-1.4.2-r1
  210. seqan-2.1.1
  211. shrimp-2.0.1
  212. shrimp-2.2.3
  213. sibsim4-0.20
  214. sim4-20030921
  215. sim4-20030921-r1
  216. snpfile-2.0.1
  217. snpfile-2.0.1-r1
  218. stride-20011129-r1
  219. t-coffee-11.00-r1
  220. t-coffee-9.03.1318-r1
  221. tophat-1.0.12
  222. tophat-2.1.1
  223. transfac-3.2
  224. tree-puzzle-5.2
  225. treeviewx-0.5.1-r2
  226. treeviewx-0.5.1-r3
  227. trf-4.04
  228. trnascan-se-1.23-r2
  229. trnascan-se-1.31
  230. uchime-4.2.40
  231. ucsc-genome-browser-260
  232. unafold-3.8
  233. unafold-3.8-r1
  234. update-blastdb-12.0.0
  235. vaal-46233
  236. vaal-46233-r2
  237. vcftools-0.1.12b
  238. velvet-1.0.18-r1
  239. velvet-1.2.10
  240. vienna-rna-2.1.1
  241. vienna-rna-2.1.8
  242. wgs-assembler-5.4
  243. wgs-assembler-6.1
  244. wgs-assembler-7.0
  245. wgs-assembler-7.0-r1
  246. wise-2.4.0_alpha
  247. yass-1.14
  248. yass-1.14-r1