| # Copyright 1999-2008 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/cns/cns-1.1.ebuild,v 1.6 2010/02/06 21:49:39 jlec Exp $ |
| |
| inherit eutils fortran toolchain-funcs |
| |
| MY_PN="${PN}_solve" |
| MY_P="${MY_PN}_${PV}" |
| |
| DESCRIPTION="Crystallography and NMR System" |
| HOMEPAGE="http://cns.csb.yale.edu/" |
| SRC_URI="${MY_P}_basic_inputs.tar.gz |
| ${MY_P}_data.tar.gz |
| test? ( ${MY_P}_test.tar.gz )" |
| RESTRICT="fetch" |
| LICENSE="cns" |
| SLOT="0" |
| KEYWORDS="ppc x86" |
| IUSE="test" |
| RDEPEND="app-shells/tcsh" |
| DEPEND="${RDEPEND}" |
| S="${WORKDIR}/${MY_P}" |
| |
| FORTRAN="g77 gfortran" |
| |
| pkg_nofetch() { |
| einfo "Fill out the form at http://cns.csb.yale.edu/cns_request/" |
| einfo "and place these files:" |
| einfo ${A} |
| einfo "in ${DISTDIR}." |
| } |
| |
| src_unpack() { |
| unpack ${A} |
| |
| # The length of time must be at least 10, not 9 |
| # http://gcc.gnu.org/ml/fortran/2006-02/msg00198.html |
| epatch "${FILESDIR}"/${PV}-time-length-10.patch |
| |
| # Set up location for the build directory |
| # Uses obsolete `sort` syntax, so we set _POSIX2_VERSION |
| sed -i \ |
| -e "s:_CNSsolve_location_:${S}:g" \ |
| -e "17 s:\(.*\):\1\nsetenv _POSIX2_VERSION 199209:g" \ |
| "${S}"/cns_solve_env |
| } |
| |
| src_compile() { |
| local GLOBALS |
| if [[ ${FORTRANC} = g77 ]]; then |
| GLOBALS="-fno-globals" |
| fi |
| |
| # make install really means build, since it's expected to be used in-place |
| emake \ |
| CC="$(tc-getCC)" \ |
| F77="${FORTRANC}" \ |
| LD="${FORTRANC}" \ |
| CCFLAGS="${CFLAGS} -DCNS_ARCH_TYPE_\$(CNS_ARCH_TYPE) \$(EXT_CCFLAGS)" \ |
| F77OPT="${FFLAGS:- -O2} \$(CNS_MALIGN_I86)" \ |
| F77STD="${GLOBALS}" \ |
| LDFLAGS="${LDFLAGS}" \ |
| g77install \ |
| || die "emake failed" |
| } |
| |
| src_test() { |
| # We need to force on g77 manually, because we can't get aliases working |
| # when we source in a -c |
| einfo "Running tests ..." |
| csh -c \ |
| "setenv CNS_G77; source cns_solve_env; make run_tests" \ |
| || die "tests failed" |
| einfo "Displaying test results ..." |
| cat "${S}"/*_g77/test/*.diff-test |
| } |
| |
| src_install() { |
| # Install to locations resembling FHS |
| sed -i \ |
| -e "s:${S}:usr:g" \ |
| -e "s:^\(setenv CNS_SOLVE.*\):\1\nsetenv CNS_ROOT usr:g" \ |
| -e "s:^\(setenv CNS_SOLVE.*\):\1\nsetenv CNS_DATA \$CNS_ROOT/share/data:g" \ |
| -e "s:^\(setenv CNS_SOLVE.*\):\1\nsetenv CNS_DOC \$CNS_ROOT/share/doc/${PF}:g" \ |
| -e "s:CNS_MODULE \$CNS_SOLVE/modules:CNS_MODULE \$CNS_DATA/modules:g" \ |
| -e "s:\$CNS_LIB:\$CNS_DATA:g" \ |
| -e "s:CNS_HELPLIB \$CNS_SOLVE/helplib:CNS_HELPLIB \$CNS_DATA/helplib:g" \ |
| -e "s:\$CNS_SOLVE/bin/cns_info:\$CNS_DATA/bin/cns_info:g" \ |
| "${S}"/cns_solve_env |
| |
| # Get rid of setup stuff we don't need in the installed script |
| sed -i \ |
| -e "83,$ d" \ |
| -e "37,46 d" \ |
| "${S}"/cns_solve_env |
| |
| newbin "${S}"/*_g77/bin/cns_solve* cns_solve \ |
| || die "install cns_solve failed" |
| |
| # Can be run by either cns_solve or cns |
| dosym cns_solve /usr/bin/cns |
| |
| # Don't want to install this |
| rm -f "${S}"/*_g77/utils/Makefile |
| |
| dobin "${S}"/*_g77/utils/* || die "install utils failed" |
| |
| dobin "${S}"/bin/cns_{edit,header,transfer,web} || die "install bin failed" |
| |
| insinto /usr/share/cns |
| doins -r "${S}"/libraries "${S}"/modules "${S}"/helplib |
| doins "${S}"/bin/cns_info |
| doins "${S}"/cns_solve_env |
| |
| dohtml \ |
| -A iq,cgi,csh,cv,def,fm,gif,hkl,inp,jpeg,lib,link,list,mask,mtf,param,pdb,pdf,pl,ps,sc,sca,sdb,seq,tbl,top \ |
| -f all_cns_info_template,omac,def \ |
| -r doc/html/* |
| |
| # Conflits with app-text/dos2unix |
| rm -f "${D}"/usr/bin/dos2unix |
| } |
| |
| pkg_postinst() { |
| ewarn "You must source ${ROOT}usr/share/cns/cns_solve_env" |
| ewarn "before running CNS. It's a C-shell script," |
| ewarn "so you also must be using csh or tcsh." |
| } |