blob: dbe474b669a367535774342ae5548a4ef2c656ae [file] [log] [blame]
// -*- C++ -*-
// Copyright (C) 2004-2008 The Trustees of Indiana University.
// Copyright (C) 2007 Douglas Gregor <doug.gregor@gmail.com>
// Copyright (C) 2007 Matthias Troyer <troyer@boost-consulting.com>
// Use, modification and distribution is subject to the Boost Software
// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt)
// Authors: Douglas Gregor
// Andrew Lumsdaine
// Matthias Troyer
//#define PBGL_PROCESS_GROUP_DEBUG
#ifndef BOOST_GRAPH_USE_MPI
#error "Parallel BGL files should not be included unless <boost/graph/use_mpi.hpp> has been included"
#endif
#include <boost/assert.hpp>
#include <algorithm>
#include <boost/graph/parallel/detail/untracked_pair.hpp>
#include <numeric>
#include <iterator>
#include <functional>
#include <vector>
#include <queue>
#include <stack>
#include <boost/graph/distributed/detail/tag_allocator.hpp>
#include <stdio.h>
// #define PBGL_PROCESS_GROUP_DEBUG
#ifdef PBGL_PROCESS_GROUP_DEBUG
# include <iostream>
#endif
namespace boost { namespace graph { namespace distributed {
struct mpi_process_group::impl
{
typedef mpi_process_group::message_header message_header;
typedef mpi_process_group::outgoing_messages outgoing_messages;
/**
* Stores the incoming messages from a particular processor.
*
* @todo Evaluate whether we should use a deque instance, which
* would reduce could reduce the cost of "receiving" messages and
allow us to deallocate memory earlier, but increases the time
spent in the synchronization step.
*/
struct incoming_messages {
incoming_messages();
~incoming_messages() {}
std::vector<message_header> headers;
buffer_type buffer;
std::vector<std::vector<message_header>::iterator> next_header;
};
struct batch_request {
MPI_Request request;
buffer_type buffer;
};
// send once we have a certain number of messages or bytes in the buffer
// these numbers need to be tuned, we keep them small at first for testing
std::size_t batch_header_number;
std::size_t batch_buffer_size;
std::size_t batch_message_size;
/**
* The actual MPI communicator used to transmit data.
*/
boost::mpi::communicator comm;
/**
* The MPI communicator used to transmit out-of-band replies.
*/
boost::mpi::communicator oob_reply_comm;
/// Outgoing message information, indexed by destination processor.
std::vector<outgoing_messages> outgoing;
/// Incoming message information, indexed by source processor.
std::vector<incoming_messages> incoming;
/// The numbers of processors that have entered a synchronization stage
std::vector<int> processors_synchronizing_stage;
/// The synchronization stage of a processor
std::vector<int> synchronizing_stage;
/// Number of processors still sending messages
std::vector<int> synchronizing_unfinished;
/// Number of batches sent since last synchronization stage
std::vector<int> number_sent_batches;
/// Number of batches received minus number of expected batches
std::vector<int> number_received_batches;
/// The context of the currently-executing trigger, or @c trc_none
/// if no trigger is executing.
trigger_receive_context trigger_context;
/// Non-zero indicates that we're processing batches
/// Increment this when processing patches,
/// decrement it when you're done.
int processing_batches;
/**
* Contains all of the active blocks corresponding to attached
* distributed data structures.
*/
blocks_type blocks;
/// Whether we are currently synchronizing
bool synchronizing;
/// The MPI requests for posted sends of oob messages
std::vector<MPI_Request> requests;
/// The MPI buffers for posted irecvs of oob messages
std::map<int,buffer_type> buffers;
/// Queue for message batches received while already processing messages
std::queue<std::pair<int,outgoing_messages> > new_batches;
/// Maximum encountered size of the new_batches queue
std::size_t max_received;
/// The MPI requests and buffers for batchess being sent
std::list<batch_request> sent_batches;
/// Maximum encountered size of the sent_batches list
std::size_t max_sent;
/// Pre-allocated requests in a pool
std::vector<batch_request> batch_pool;
/// A stack controlling which batches are available
std::stack<std::size_t> free_batches;
void free_sent_batches();
// Tag allocator
detail::tag_allocator allocated_tags;
impl(std::size_t num_headers, std::size_t buffers_size,
communicator_type parent_comm);
~impl();
private:
void set_batch_size(std::size_t header_num, std::size_t buffer_sz);
};
inline trigger_receive_context mpi_process_group::trigger_context() const
{
return impl_->trigger_context;
}
template<typename T>
void
mpi_process_group::send_impl(int dest, int tag, const T& value,
mpl::true_ /*is_mpi_datatype*/) const
{
BOOST_ASSERT(tag < msg_reserved_first || tag > msg_reserved_last);
impl::outgoing_messages& outgoing = impl_->outgoing[dest];
// Start constructing the message header
impl::message_header header;
header.source = process_id(*this);
header.tag = tag;
header.offset = outgoing.buffer.size();
boost::mpi::packed_oarchive oa(impl_->comm, outgoing.buffer);
oa << value;
#ifdef PBGL_PROCESS_GROUP_DEBUG
std::cerr << "SEND: " << process_id(*this) << " -> " << dest << ", tag = "
<< tag << ", bytes = " << packed_size << std::endl;
#endif
// Store the header
header.bytes = outgoing.buffer.size() - header.offset;
outgoing.headers.push_back(header);
maybe_send_batch(dest);
}
template<typename T>
void
mpi_process_group::send_impl(int dest, int tag, const T& value,
mpl::false_ /*is_mpi_datatype*/) const
{
BOOST_ASSERT(tag < msg_reserved_first || tag > msg_reserved_last);
impl::outgoing_messages& outgoing = impl_->outgoing[dest];
// Start constructing the message header
impl::message_header header;
header.source = process_id(*this);
header.tag = tag;
header.offset = outgoing.buffer.size();
// Serialize into the buffer
boost::mpi::packed_oarchive out(impl_->comm, outgoing.buffer);
out << value;
// Store the header
header.bytes = outgoing.buffer.size() - header.offset;
outgoing.headers.push_back(header);
maybe_send_batch(dest);
#ifdef PBGL_PROCESS_GROUP_DEBUG
std::cerr << "SEND: " << process_id(*this) << " -> " << dest << ", tag = "
<< tag << ", bytes = " << header.bytes << std::endl;
#endif
}
template<typename T>
inline void
send(const mpi_process_group& pg, mpi_process_group::process_id_type dest,
int tag, const T& value)
{
pg.send_impl(dest, pg.encode_tag(pg.my_block_number(), tag), value,
boost::mpi::is_mpi_datatype<T>());
}
template<typename T>
typename enable_if<boost::mpi::is_mpi_datatype<T>, void>::type
send(const mpi_process_group& pg, mpi_process_group::process_id_type dest,
int tag, const T values[], std::size_t n)
{
pg.send_impl(dest, pg.encode_tag(pg.my_block_number(), tag),
boost::serialization::make_array(values,n),
boost::mpl::true_());
}
template<typename T>
typename disable_if<boost::mpi::is_mpi_datatype<T>, void>::type
mpi_process_group::
array_send_impl(int dest, int tag, const T values[], std::size_t n) const
{
BOOST_ASSERT(tag < msg_reserved_first || tag > msg_reserved_last);
impl::outgoing_messages& outgoing = impl_->outgoing[dest];
// Start constructing the message header
impl::message_header header;
header.source = process_id(*this);
header.tag = tag;
header.offset = outgoing.buffer.size();
// Serialize into the buffer
boost::mpi::packed_oarchive out(impl_->comm, outgoing.buffer);
out << n;
for (std::size_t i = 0; i < n; ++i)
out << values[i];
// Store the header
header.bytes = outgoing.buffer.size() - header.offset;
outgoing.headers.push_back(header);
maybe_send_batch(dest);
#ifdef PBGL_PROCESS_GROUP_DEBUG
std::cerr << "SEND: " << process_id(*this) << " -> " << dest << ", tag = "
<< tag << ", bytes = " << header.bytes << std::endl;
#endif
}
template<typename T>
typename disable_if<boost::mpi::is_mpi_datatype<T>, void>::type
send(const mpi_process_group& pg, mpi_process_group::process_id_type dest,
int tag, const T values[], std::size_t n)
{
pg.array_send_impl(dest, pg.encode_tag(pg.my_block_number(), tag),
values, n);
}
template<typename InputIterator>
void
send(const mpi_process_group& pg, mpi_process_group::process_id_type dest,
int tag, InputIterator first, InputIterator last)
{
typedef typename std::iterator_traits<InputIterator>::value_type value_type;
std::vector<value_type> values(first, last);
if (values.empty()) send(pg, dest, tag, static_cast<value_type*>(0), 0);
else send(pg, dest, tag, &values[0], values.size());
}
template<typename T>
bool
mpi_process_group::receive_impl(int source, int tag, T& value,
mpl::true_ /*is_mpi_datatype*/) const
{
#ifdef PBGL_PROCESS_GROUP_DEBUG
std::cerr << "RECV: " << process_id(*this) << " <- " << source << ", tag = "
<< tag << std::endl;
#endif
impl::incoming_messages& incoming = impl_->incoming[source];
// Find the next header with the right tag
std::vector<impl::message_header>::iterator header =
incoming.next_header[my_block_number()];
while (header != incoming.headers.end() && header->tag != tag) ++header;
// If no header is found, notify the caller
if (header == incoming.headers.end()) return false;
// Unpack the data
if (header->bytes > 0) {
boost::mpi::packed_iarchive ia(impl_->comm, incoming.buffer,
archive::no_header, header->offset);
ia >> value;
}
// Mark this message as received
header->tag = -1;
// Move the "next header" indicator to the next unreceived message
while (incoming.next_header[my_block_number()] != incoming.headers.end()
&& incoming.next_header[my_block_number()]->tag == -1)
++incoming.next_header[my_block_number()];
if (incoming.next_header[my_block_number()] == incoming.headers.end()) {
bool finished = true;
for (std::size_t i = 0; i < incoming.next_header.size() && finished; ++i) {
if (incoming.next_header[i] != incoming.headers.end()) finished = false;
}
if (finished) {
std::vector<impl::message_header> no_headers;
incoming.headers.swap(no_headers);
buffer_type empty_buffer;
incoming.buffer.swap(empty_buffer);
for (std::size_t i = 0; i < incoming.next_header.size(); ++i)
incoming.next_header[i] = incoming.headers.end();
}
}
return true;
}
template<typename T>
bool
mpi_process_group::receive_impl(int source, int tag, T& value,
mpl::false_ /*is_mpi_datatype*/) const
{
impl::incoming_messages& incoming = impl_->incoming[source];
// Find the next header with the right tag
std::vector<impl::message_header>::iterator header =
incoming.next_header[my_block_number()];
while (header != incoming.headers.end() && header->tag != tag) ++header;
// If no header is found, notify the caller
if (header == incoming.headers.end()) return false;
// Deserialize the data
boost::mpi::packed_iarchive in(impl_->comm, incoming.buffer,
archive::no_header, header->offset);
in >> value;
// Mark this message as received
header->tag = -1;
// Move the "next header" indicator to the next unreceived message
while (incoming.next_header[my_block_number()] != incoming.headers.end()
&& incoming.next_header[my_block_number()]->tag == -1)
++incoming.next_header[my_block_number()];
if (incoming.next_header[my_block_number()] == incoming.headers.end()) {
bool finished = true;
for (std::size_t i = 0; i < incoming.next_header.size() && finished; ++i) {
if (incoming.next_header[i] != incoming.headers.end()) finished = false;
}
if (finished) {
std::vector<impl::message_header> no_headers;
incoming.headers.swap(no_headers);
buffer_type empty_buffer;
incoming.buffer.swap(empty_buffer);
for (std::size_t i = 0; i < incoming.next_header.size(); ++i)
incoming.next_header[i] = incoming.headers.end();
}
}
return true;
}
template<typename T>
typename disable_if<boost::mpi::is_mpi_datatype<T>, bool>::type
mpi_process_group::
array_receive_impl(int source, int tag, T* values, std::size_t& n) const
{
impl::incoming_messages& incoming = impl_->incoming[source];
// Find the next header with the right tag
std::vector<impl::message_header>::iterator header =
incoming.next_header[my_block_number()];
while (header != incoming.headers.end() && header->tag != tag) ++header;
// If no header is found, notify the caller
if (header == incoming.headers.end()) return false;
// Deserialize the data
boost::mpi::packed_iarchive in(impl_->comm, incoming.buffer,
archive::no_header, header->offset);
std::size_t num_sent;
in >> num_sent;
if (num_sent > n)
std::cerr << "ERROR: Have " << num_sent << " items but only space for "
<< n << " items\n";
for (std::size_t i = 0; i < num_sent; ++i)
in >> values[i];
n = num_sent;
// Mark this message as received
header->tag = -1;
// Move the "next header" indicator to the next unreceived message
while (incoming.next_header[my_block_number()] != incoming.headers.end()
&& incoming.next_header[my_block_number()]->tag == -1)
++incoming.next_header[my_block_number()];
if (incoming.next_header[my_block_number()] == incoming.headers.end()) {
bool finished = true;
for (std::size_t i = 0; i < incoming.next_header.size() && finished; ++i) {
if (incoming.next_header[i] != incoming.headers.end()) finished = false;
}
if (finished) {
std::vector<impl::message_header> no_headers;
incoming.headers.swap(no_headers);
buffer_type empty_buffer;
incoming.buffer.swap(empty_buffer);
for (std::size_t i = 0; i < incoming.next_header.size(); ++i)
incoming.next_header[i] = incoming.headers.end();
}
}
return true;
}
// Construct triggers
template<typename Type, typename Handler>
void mpi_process_group::trigger(int tag, const Handler& handler)
{
BOOST_ASSERT(block_num);
install_trigger(tag,my_block_number(),shared_ptr<trigger_base>(
new trigger_launcher<Type, Handler>(*this, tag, handler)));
}
template<typename Type, typename Handler>
void mpi_process_group::trigger_with_reply(int tag, const Handler& handler)
{
BOOST_ASSERT(block_num);
install_trigger(tag,my_block_number(),shared_ptr<trigger_base>(
new reply_trigger_launcher<Type, Handler>(*this, tag, handler)));
}
template<typename Type, typename Handler>
void mpi_process_group::global_trigger(int tag, const Handler& handler,
std::size_t sz)
{
if (sz==0) // normal trigger
install_trigger(tag,0,shared_ptr<trigger_base>(
new global_trigger_launcher<Type, Handler>(*this, tag, handler)));
else // trigger with irecv
install_trigger(tag,0,shared_ptr<trigger_base>(
new global_irecv_trigger_launcher<Type, Handler>(*this, tag, handler,sz)));
}
namespace detail {
template<typename Type>
void do_oob_receive(mpi_process_group const& self,
int source, int tag, Type& data, mpl::true_ /*is_mpi_datatype*/)
{
using boost::mpi::get_mpi_datatype;
//self.impl_->comm.recv(source,tag,data);
MPI_Recv(&data, 1, get_mpi_datatype<Type>(data), source, tag, self.impl_->comm,
MPI_STATUS_IGNORE);
}
template<typename Type>
void do_oob_receive(mpi_process_group const& self,
int source, int tag, Type& data, mpl::false_ /*is_mpi_datatype*/)
{
// self.impl_->comm.recv(source,tag,data);
// Receive the size of the data packet
boost::mpi::status status;
status = self.impl_->comm.probe(source, tag);
#if BOOST_VERSION >= 103600
int size = status.count<boost::mpi::packed>().get();
#else
int size;
MPI_Status& mpi_status = status;
MPI_Get_count(&mpi_status, MPI_PACKED, &size);
#endif
// Receive the data packed itself
boost::mpi::packed_iarchive in(self.impl_->comm);
in.resize(size);
MPI_Recv(in.address(), size, MPI_PACKED, source, tag, self.impl_->comm,
MPI_STATUS_IGNORE);
// Deserialize the data
in >> data;
}
template<typename Type>
void do_oob_receive(mpi_process_group const& self, int source, int tag, Type& data)
{
do_oob_receive(self, source, tag, data,
boost::mpi::is_mpi_datatype<Type>());
}
} // namespace detail
template<typename Type, typename Handler>
void
mpi_process_group::trigger_launcher<Type, Handler>::
receive(mpi_process_group const&, int source, int tag,
trigger_receive_context context, int block) const
{
#ifdef PBGL_PROCESS_GROUP_DEBUG
std::cerr << (out_of_band? "OOB trigger" : "Trigger")
<< " receive from source " << source << " and tag " << tag
<< " in block " << (block == -1 ? self.my_block_number() : block) << std::endl;
#endif
Type data;
if (context == trc_out_of_band) {
// Receive the message directly off the wire
int realtag = self.encode_tag(
block == -1 ? self.my_block_number() : block, tag);
detail::do_oob_receive(self,source,realtag,data);
}
else
// Receive the message out of the local buffer
boost::graph::distributed::receive(self, source, tag, data);
// Pass the message off to the handler
handler(source, tag, data, context);
}
template<typename Type, typename Handler>
void
mpi_process_group::reply_trigger_launcher<Type, Handler>::
receive(mpi_process_group const&, int source, int tag,
trigger_receive_context context, int block) const
{
#ifdef PBGL_PROCESS_GROUP_DEBUG
std::cerr << (out_of_band? "OOB reply trigger" : "Reply trigger")
<< " receive from source " << source << " and tag " << tag
<< " in block " << (block == -1 ? self.my_block_number() : block) << std::endl;
#endif
BOOST_ASSERT(context == trc_out_of_band);
boost::parallel::detail::untracked_pair<int, Type> data;
// Receive the message directly off the wire
int realtag = self.encode_tag(block == -1 ? self.my_block_number() : block,
tag);
detail::do_oob_receive(self, source, realtag, data);
// Pass the message off to the handler and send the result back to
// the source.
send_oob(self, source, data.first,
handler(source, tag, data.second, context), -2);
}
template<typename Type, typename Handler>
void
mpi_process_group::global_trigger_launcher<Type, Handler>::
receive(mpi_process_group const& self, int source, int tag,
trigger_receive_context context, int block) const
{
#ifdef PBGL_PROCESS_GROUP_DEBUG
std::cerr << (out_of_band? "OOB trigger" : "Trigger")
<< " receive from source " << source << " and tag " << tag
<< " in block " << (block == -1 ? self.my_block_number() : block) << std::endl;
#endif
Type data;
if (context == trc_out_of_band) {
// Receive the message directly off the wire
int realtag = self.encode_tag(
block == -1 ? self.my_block_number() : block, tag);
detail::do_oob_receive(self,source,realtag,data);
}
else
// Receive the message out of the local buffer
boost::graph::distributed::receive(self, source, tag, data);
// Pass the message off to the handler
handler(self, source, tag, data, context);
}
template<typename Type, typename Handler>
void
mpi_process_group::global_irecv_trigger_launcher<Type, Handler>::
receive(mpi_process_group const& self, int source, int tag,
trigger_receive_context context, int block) const
{
#ifdef PBGL_PROCESS_GROUP_DEBUG
std::cerr << (out_of_band? "OOB trigger" : "Trigger")
<< " receive from source " << source << " and tag " << tag
<< " in block " << (block == -1 ? self.my_block_number() : block) << std::endl;
#endif
Type data;
if (context == trc_out_of_band) {
return;
}
BOOST_ASSERT (context == trc_irecv_out_of_band);
// force posting of new MPI_Irecv, even though buffer is already allocated
boost::mpi::packed_iarchive ia(self.impl_->comm,self.impl_->buffers[tag]);
ia >> data;
// Start a new receive
prepare_receive(self,tag,true);
// Pass the message off to the handler
handler(self, source, tag, data, context);
}
template<typename Type, typename Handler>
void
mpi_process_group::global_irecv_trigger_launcher<Type, Handler>::
prepare_receive(mpi_process_group const& self, int tag, bool force) const
{
#ifdef PBGL_PROCESS_GROUP_DEBUG
std::cerr << ("Posting Irecv for trigger")
<< " receive with tag " << tag << std::endl;
#endif
if (self.impl_->buffers.find(tag) == self.impl_->buffers.end()) {
self.impl_->buffers[tag].resize(buffer_size);
force = true;
}
BOOST_ASSERT(static_cast<int>(self.impl_->buffers[tag].size()) >= buffer_size);
//BOOST_MPL_ASSERT(mpl::not_<is_mpi_datatype<Type> >);
if (force) {
self.impl_->requests.push_back(MPI_Request());
MPI_Request* request = &self.impl_->requests.back();
MPI_Irecv(&self.impl_->buffers[tag].front(),buffer_size,
MPI_PACKED,MPI_ANY_SOURCE,tag,self.impl_->comm,request);
}
}
template<typename T>
inline mpi_process_group::process_id_type
receive(const mpi_process_group& pg, int tag, T& value)
{
for (std::size_t source = 0; source < pg.impl_->incoming.size(); ++source) {
if (pg.receive_impl(source, pg.encode_tag(pg.my_block_number(), tag),
value, boost::mpi::is_mpi_datatype<T>()))
return source;
}
BOOST_ASSERT (false);
}
template<typename T>
typename
enable_if<boost::mpi::is_mpi_datatype<T>,
std::pair<mpi_process_group::process_id_type, std::size_t> >::type
receive(const mpi_process_group& pg, int tag, T values[], std::size_t n)
{
for (std::size_t source = 0; source < pg.impl_->incoming.size(); ++source) {
bool result =
pg.receive_impl(source, pg.encode_tag(pg.my_block_number(), tag),
boost::serialization::make_array(values,n),
boost::mpl::true_());
if (result)
return std::make_pair(source, n);
}
BOOST_ASSERT(false);
}
template<typename T>
typename
disable_if<boost::mpi::is_mpi_datatype<T>,
std::pair<mpi_process_group::process_id_type, std::size_t> >::type
receive(const mpi_process_group& pg, int tag, T values[], std::size_t n)
{
for (std::size_t source = 0; source < pg.impl_->incoming.size(); ++source) {
if (pg.array_receive_impl(source, pg.encode_tag(pg.my_block_number(), tag),
values, n))
return std::make_pair(source, n);
}
BOOST_ASSERT(false);
}
template<typename T>
mpi_process_group::process_id_type
receive(const mpi_process_group& pg,
mpi_process_group::process_id_type source, int tag, T& value)
{
if (pg.receive_impl(source, pg.encode_tag(pg.my_block_number(), tag),
value, boost::mpi::is_mpi_datatype<T>()))
return source;
else {
fprintf(stderr,
"Process %d failed to receive a message from process %d with tag %d in block %d.\n",
process_id(pg), source, tag, pg.my_block_number());
BOOST_ASSERT(false);
exit(1);
}
}
template<typename T>
typename
enable_if<boost::mpi::is_mpi_datatype<T>,
std::pair<mpi_process_group::process_id_type, std::size_t> >::type
receive(const mpi_process_group& pg, int source, int tag, T values[],
std::size_t n)
{
if (pg.receive_impl(source, pg.encode_tag(pg.my_block_number(), tag),
boost::serialization::make_array(values,n),
boost::mpl::true_()))
return std::make_pair(source,n);
else {
fprintf(stderr,
"Process %d failed to receive a message from process %d with tag %d in block %d.\n",
process_id(pg), source, tag, pg.my_block_number());
BOOST_ASSERT(false);
exit(1);
}
}
template<typename T>
typename
disable_if<boost::mpi::is_mpi_datatype<T>,
std::pair<mpi_process_group::process_id_type, std::size_t> >::type
receive(const mpi_process_group& pg, int source, int tag, T values[],
std::size_t n)
{
pg.array_receive_impl(source, pg.encode_tag(pg.my_block_number(), tag),
values, n);
return std::make_pair(source, n);
}
template<typename T, typename BinaryOperation>
T*
all_reduce(const mpi_process_group& pg, T* first, T* last, T* out,
BinaryOperation bin_op)
{
synchronize(pg);
bool inplace = first == out;
if (inplace) out = new T [last-first];
boost::mpi::all_reduce(boost::mpi::communicator(communicator(pg),
boost::mpi::comm_attach),
first, last-first, out, bin_op);
if (inplace) {
std::copy(out, out + (last-first), first);
delete [] out;
return last;
}
return out;
}
template<typename T>
void
broadcast(const mpi_process_group& pg, T& val,
mpi_process_group::process_id_type root)
{
// broadcast the seed
boost::mpi::communicator comm(communicator(pg),boost::mpi::comm_attach);
boost::mpi::broadcast(comm,val,root);
}
template<typename T, typename BinaryOperation>
T*
scan(const mpi_process_group& pg, T* first, T* last, T* out,
BinaryOperation bin_op)
{
synchronize(pg);
bool inplace = first == out;
if (inplace) out = new T [last-first];
boost::mpi::scan(communicator(pg), first, last-first, out, bin_op);
if (inplace) {
std::copy(out, out + (last-first), first);
delete [] out;
return last;
}
return out;
}
template<typename InputIterator, typename T>
void
all_gather(const mpi_process_group& pg, InputIterator first,
InputIterator last, std::vector<T>& out)
{
synchronize(pg);
// Stick a copy of the local values into a vector, so we can broadcast it
std::vector<T> local_values(first, last);
// Collect the number of vertices stored in each process
int size = local_values.size();
std::vector<int> sizes(num_processes(pg));
int result = MPI_Allgather(&size, 1, MPI_INT,
&sizes[0], 1, MPI_INT,
communicator(pg));
BOOST_ASSERT(result == MPI_SUCCESS);
// Adjust sizes based on the number of bytes
std::transform(sizes.begin(), sizes.end(), sizes.begin(),
std::bind2nd(std::multiplies<int>(), sizeof(T)));
// Compute displacements
std::vector<int> displacements;
displacements.reserve(sizes.size() + 1);
displacements.push_back(0);
std::partial_sum(sizes.begin(), sizes.end(),
std::back_inserter(displacements));
// Gather all of the values
out.resize(displacements.back() / sizeof(T));
if (!out.empty()) {
result = MPI_Allgatherv(local_values.empty()? (void*)&local_values
/* local results */: (void*)&local_values[0],
local_values.size() * sizeof(T),
MPI_BYTE,
&out[0], &sizes[0], &displacements[0], MPI_BYTE,
communicator(pg));
}
BOOST_ASSERT(result == MPI_SUCCESS);
}
template<typename InputIterator>
mpi_process_group
process_subgroup(const mpi_process_group& pg,
InputIterator first, InputIterator last)
{
/*
boost::mpi::group current_group = communicator(pg).group();
boost::mpi::group new_group = current_group.include(first,last);
boost::mpi::communicator new_comm(communicator(pg),new_group);
return mpi_process_group(new_comm);
*/
std::vector<int> ranks(first, last);
MPI_Group current_group;
int result = MPI_Comm_group(communicator(pg), &current_group);
BOOST_ASSERT(result == MPI_SUCCESS);
MPI_Group new_group;
result = MPI_Group_incl(current_group, ranks.size(), &ranks[0], &new_group);
BOOST_ASSERT(result == MPI_SUCCESS);
MPI_Comm new_comm;
result = MPI_Comm_create(communicator(pg), new_group, &new_comm);
BOOST_ASSERT(result == MPI_SUCCESS);
result = MPI_Group_free(&new_group);
BOOST_ASSERT(result == MPI_SUCCESS);
result = MPI_Group_free(&current_group);
BOOST_ASSERT(result == MPI_SUCCESS);
if (new_comm != MPI_COMM_NULL) {
mpi_process_group result_pg(boost::mpi::communicator(new_comm,boost::mpi::comm_attach));
result = MPI_Comm_free(&new_comm);
BOOST_ASSERT(result == 0);
return result_pg;
} else {
return mpi_process_group(mpi_process_group::create_empty());
}
}
template<typename Receiver>
Receiver* mpi_process_group::get_receiver()
{
return impl_->blocks[my_block_number()]->on_receive
.template target<Receiver>();
}
template<typename T>
typename enable_if<boost::mpi::is_mpi_datatype<T> >::type
receive_oob(const mpi_process_group& pg,
mpi_process_group::process_id_type source, int tag, T& value, int block)
{
using boost::mpi::get_mpi_datatype;
// Determine the actual message we expect to receive, and which
// communicator it will come by.
std::pair<boost::mpi::communicator, int> actual
= pg.actual_communicator_and_tag(tag, block);
// Post a non-blocking receive that waits until we complete this request.
MPI_Request request;
MPI_Irecv(&value, 1, get_mpi_datatype<T>(value),
source, actual.second, actual.first, &request);
int done = 0;
do {
MPI_Test(&request, &done, MPI_STATUS_IGNORE);
if (!done)
pg.poll(/*wait=*/false, block);
} while (!done);
}
template<typename T>
typename disable_if<boost::mpi::is_mpi_datatype<T> >::type
receive_oob(const mpi_process_group& pg,
mpi_process_group::process_id_type source, int tag, T& value, int block)
{
// Determine the actual message we expect to receive, and which
// communicator it will come by.
std::pair<boost::mpi::communicator, int> actual
= pg.actual_communicator_and_tag(tag, block);
boost::optional<boost::mpi::status> status;
do {
status = actual.first.iprobe(source, actual.second);
if (!status)
pg.poll();
} while (!status);
//actual.first.recv(status->source(), status->tag(),value);
// Allocate the receive buffer
boost::mpi::packed_iarchive in(actual.first);
#if BOOST_VERSION >= 103600
in.resize(status->count<boost::mpi::packed>().get());
#else
int size;
MPI_Status mpi_status = *status;
MPI_Get_count(&mpi_status, MPI_PACKED, &size);
in.resize(size);
#endif
// Receive the message data
MPI_Recv(in.address(), in.size(), MPI_PACKED,
status->source(), status->tag(), actual.first, MPI_STATUS_IGNORE);
// Unpack the message data
in >> value;
}
template<typename SendT, typename ReplyT>
typename enable_if<boost::mpi::is_mpi_datatype<ReplyT> >::type
send_oob_with_reply(const mpi_process_group& pg,
mpi_process_group::process_id_type dest,
int tag, const SendT& send_value, ReplyT& reply_value,
int block)
{
detail::tag_allocator::token reply_tag = pg.impl_->allocated_tags.get_tag();
send_oob(pg, dest, tag, boost::parallel::detail::make_untracked_pair(
(int)reply_tag, send_value), block);
receive_oob(pg, dest, reply_tag, reply_value);
}
template<typename SendT, typename ReplyT>
typename disable_if<boost::mpi::is_mpi_datatype<ReplyT> >::type
send_oob_with_reply(const mpi_process_group& pg,
mpi_process_group::process_id_type dest,
int tag, const SendT& send_value, ReplyT& reply_value,
int block)
{
detail::tag_allocator::token reply_tag = pg.impl_->allocated_tags.get_tag();
send_oob(pg, dest, tag,
boost::parallel::detail::make_untracked_pair((int)reply_tag,
send_value), block);
receive_oob(pg, dest, reply_tag, reply_value);
}
} } } // end namespace boost::graph::distributed