sci-mathematics/topcom/files/topcom-0.17.7-buildsystem.patch

diff -U 3 -dHrN topcom-0.17.7.orig/src/Makefile.in topcom-0.17.7/src/Makefile.in
--- topcom-0.17.7.orig/src/Makefile.in	2016-07-08 12:46:13.000000000 +0200
+++ topcom-0.17.7/src/Makefile.in	2016-09-25 20:22:51.729578197 +0200
@@ -119,249 +119,206 @@
 am_B_A_OBJECTS = B_A.$(OBJEXT)
 B_A_OBJECTS = $(am_B_A_OBJECTS)
 B_A_LDADD = $(LDADD)
-B_A_DEPENDENCIES = ../lib-src/libTOPCOM.a ../lib-src-reg/libCHECKREG.a \
-	../external/lib/libcddgmp.a ../external/lib/libgmpxx.a \
-	../external/lib/libgmp.a
+B_A_DEPENDENCIES = ../lib-src/libTOPCOM.a ../lib-src-reg/libCHECKREG.a
 am_B_A_center_OBJECTS = B_A_center.$(OBJEXT)
 B_A_center_OBJECTS = $(am_B_A_center_OBJECTS)
 B_A_center_LDADD = $(LDADD)
 B_A_center_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_B_D_OBJECTS = B_D.$(OBJEXT)
 B_D_OBJECTS = $(am_B_D_OBJECTS)
 B_D_LDADD = $(LDADD)
-B_D_DEPENDENCIES = ../lib-src/libTOPCOM.a ../lib-src-reg/libCHECKREG.a \
-	../external/lib/libcddgmp.a ../external/lib/libgmpxx.a \
-	../external/lib/libgmp.a
+B_D_DEPENDENCIES = ../lib-src/libTOPCOM.a ../lib-src-reg/libCHECKREG.a
 am_chiro2allfinetriangs_OBJECTS = chiro2allfinetriangs.$(OBJEXT)
 chiro2allfinetriangs_OBJECTS = $(am_chiro2allfinetriangs_OBJECTS)
 chiro2allfinetriangs_LDADD = $(LDADD)
 chiro2allfinetriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2alltriangs_OBJECTS = chiro2alltriangs.$(OBJEXT)
 chiro2alltriangs_OBJECTS = $(am_chiro2alltriangs_OBJECTS)
 chiro2alltriangs_LDADD = $(LDADD)
 chiro2alltriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2circuits_OBJECTS = chiro2circuits.$(OBJEXT)
 chiro2circuits_OBJECTS = $(am_chiro2circuits_OBJECTS)
 chiro2circuits_LDADD = $(LDADD)
 chiro2circuits_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a
 am_chiro2cocircuits_OBJECTS = chiro2cocircuits.$(OBJEXT)
 chiro2cocircuits_OBJECTS = $(am_chiro2cocircuits_OBJECTS)
 chiro2cocircuits_LDADD = $(LDADD)
 chiro2cocircuits_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2dual_OBJECTS = chiro2dual.$(OBJEXT)
 chiro2dual_OBJECTS = $(am_chiro2dual_OBJECTS)
 chiro2dual_LDADD = $(LDADD)
 chiro2dual_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2finetriang_OBJECTS = chiro2finetriang.$(OBJEXT)
 chiro2finetriang_OBJECTS = $(am_chiro2finetriang_OBJECTS)
 chiro2finetriang_LDADD = $(LDADD)
 chiro2finetriang_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2finetriangs_OBJECTS = chiro2finetriangs.$(OBJEXT)
 chiro2finetriangs_OBJECTS = $(am_chiro2finetriangs_OBJECTS)
 chiro2finetriangs_LDADD = $(LDADD)
 chiro2finetriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2mintriang_OBJECTS = chiro2mintriang.$(OBJEXT)
 chiro2mintriang_OBJECTS = $(am_chiro2mintriang_OBJECTS)
 chiro2mintriang_LDADD = $(LDADD)
 chiro2mintriang_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2nallfinetriangs_OBJECTS = chiro2nallfinetriangs.$(OBJEXT)
 chiro2nallfinetriangs_OBJECTS = $(am_chiro2nallfinetriangs_OBJECTS)
 chiro2nallfinetriangs_LDADD = $(LDADD)
 chiro2nallfinetriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2nalltriangs_OBJECTS = chiro2nalltriangs.$(OBJEXT)
 chiro2nalltriangs_OBJECTS = $(am_chiro2nalltriangs_OBJECTS)
 chiro2nalltriangs_LDADD = $(LDADD)
 chiro2nalltriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2nfinetriangs_OBJECTS = chiro2nfinetriangs.$(OBJEXT)
 chiro2nfinetriangs_OBJECTS = $(am_chiro2nfinetriangs_OBJECTS)
 chiro2nfinetriangs_LDADD = $(LDADD)
 chiro2nfinetriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2ntriangs_OBJECTS = chiro2ntriangs.$(OBJEXT)
 chiro2ntriangs_OBJECTS = $(am_chiro2ntriangs_OBJECTS)
 chiro2ntriangs_LDADD = $(LDADD)
 chiro2ntriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2placingtriang_OBJECTS = chiro2placingtriang.$(OBJEXT)
 chiro2placingtriang_OBJECTS = $(am_chiro2placingtriang_OBJECTS)
 chiro2placingtriang_LDADD = $(LDADD)
 chiro2placingtriang_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_chiro2triangs_OBJECTS = chiro2triangs.$(OBJEXT)
 chiro2triangs_OBJECTS = $(am_chiro2triangs_OBJECTS)
 chiro2triangs_LDADD = $(LDADD)
 chiro2triangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_cocircuits2facets_OBJECTS = cocircuits2facets.$(OBJEXT)
 cocircuits2facets_OBJECTS = $(am_cocircuits2facets_OBJECTS)
 cocircuits2facets_LDADD = $(LDADD)
 cocircuits2facets_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a
 am_cross_OBJECTS = cross.$(OBJEXT)
 cross_OBJECTS = $(am_cross_OBJECTS)
 cross_LDADD = $(LDADD)
 cross_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a
 am_cube_OBJECTS = cube.$(OBJEXT)
 cube_OBJECTS = $(am_cube_OBJECTS)
 cube_LDADD = $(LDADD)
 cube_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_cyclic_OBJECTS = cyclic.$(OBJEXT)
 cyclic_OBJECTS = $(am_cyclic_OBJECTS)
 cyclic_LDADD = $(LDADD)
 cyclic_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_hypersimplex_OBJECTS = hypersimplex.$(OBJEXT)
 hypersimplex_OBJECTS = $(am_hypersimplex_OBJECTS)
 hypersimplex_LDADD = $(LDADD)
 hypersimplex_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_lattice_OBJECTS = lattice.$(OBJEXT)
 lattice_OBJECTS = $(am_lattice_OBJECTS)
 lattice_LDADD = $(LDADD)
 lattice_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2allfinetriangs_OBJECTS = points2allfinetriangs.$(OBJEXT)
 points2allfinetriangs_OBJECTS = $(am_points2allfinetriangs_OBJECTS)
 points2allfinetriangs_LDADD = $(LDADD)
 points2allfinetriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2alltriangs_OBJECTS = points2alltriangs.$(OBJEXT)
 points2alltriangs_OBJECTS = $(am_points2alltriangs_OBJECTS)
 points2alltriangs_LDADD = $(LDADD)
 points2alltriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2chiro_OBJECTS = points2chiro.$(OBJEXT)
 points2chiro_OBJECTS = $(am_points2chiro_OBJECTS)
 points2chiro_LDADD = $(LDADD)
 points2chiro_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2facets_OBJECTS = points2facets.$(OBJEXT)
 points2facets_OBJECTS = $(am_points2facets_OBJECTS)
 points2facets_LDADD = $(LDADD)
 points2facets_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2finetriang_OBJECTS = points2finetriang.$(OBJEXT)
 points2finetriang_OBJECTS = $(am_points2finetriang_OBJECTS)
 points2finetriang_LDADD = $(LDADD)
 points2finetriang_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2finetriangs_OBJECTS = points2finetriangs.$(OBJEXT)
 points2finetriangs_OBJECTS = $(am_points2finetriangs_OBJECTS)
 points2finetriangs_LDADD = $(LDADD)
 points2finetriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2flips_OBJECTS = points2flips.$(OBJEXT)
 points2flips_OBJECTS = $(am_points2flips_OBJECTS)
 points2flips_LDADD = $(LDADD)
 points2flips_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2nallfinetriangs_OBJECTS = points2nallfinetriangs.$(OBJEXT)
 points2nallfinetriangs_OBJECTS = $(am_points2nallfinetriangs_OBJECTS)
 points2nallfinetriangs_LDADD = $(LDADD)
 points2nallfinetriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2nalltriangs_OBJECTS = points2nalltriangs.$(OBJEXT)
 points2nalltriangs_OBJECTS = $(am_points2nalltriangs_OBJECTS)
 points2nalltriangs_LDADD = $(LDADD)
 points2nalltriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2nfinetriangs_OBJECTS = points2nfinetriangs.$(OBJEXT)
 points2nfinetriangs_OBJECTS = $(am_points2nfinetriangs_OBJECTS)
 points2nfinetriangs_LDADD = $(LDADD)
 points2nfinetriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2nflips_OBJECTS = points2nflips.$(OBJEXT)
 points2nflips_OBJECTS = $(am_points2nflips_OBJECTS)
 points2nflips_LDADD = $(LDADD)
 points2nflips_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2ntriangs_OBJECTS = points2ntriangs.$(OBJEXT)
 points2ntriangs_OBJECTS = $(am_points2ntriangs_OBJECTS)
 points2ntriangs_LDADD = $(LDADD)
 points2ntriangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2placingtriang_OBJECTS = points2placingtriang.$(OBJEXT)
 points2placingtriang_OBJECTS = $(am_points2placingtriang_OBJECTS)
 points2placingtriang_LDADD = $(LDADD)
 points2placingtriang_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2triangs_OBJECTS = points2triangs.$(OBJEXT)
 points2triangs_OBJECTS = $(am_points2triangs_OBJECTS)
 points2triangs_LDADD = $(LDADD)
 points2triangs_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_points2volume_OBJECTS = points2volume.$(OBJEXT)
 points2volume_OBJECTS = $(am_points2volume_OBJECTS)
 points2volume_LDADD = $(LDADD)
 points2volume_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_santos_22_triang_OBJECTS = santos_22_triang.$(OBJEXT)
 santos_22_triang_OBJECTS = $(am_santos_22_triang_OBJECTS)
 santos_22_triang_LDADD = $(LDADD)
 santos_22_triang_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_santos_dim4_triang_OBJECTS = santos_dim4_triang.$(OBJEXT)
 santos_dim4_triang_OBJECTS = $(am_santos_dim4_triang_OBJECTS)
 santos_dim4_triang_LDADD = $(LDADD)
 santos_dim4_triang_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 am_santos_triang_OBJECTS = santos_triang.$(OBJEXT)
 santos_triang_OBJECTS = $(am_santos_triang_OBJECTS)
 santos_triang_LDADD = $(LDADD)
 santos_triang_DEPENDENCIES = ../lib-src/libTOPCOM.a \
-	../lib-src-reg/libCHECKREG.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src-reg/libCHECKREG.a 
 AM_V_P = $(am__v_P_@AM_V@)
 am__v_P_ = $(am__v_P_@AM_DEFAULT_V@)
 am__v_P_0 = false
@@ -591,9 +548,6 @@
 santos_22_triang_SOURCES = santos_22_triang.cc
 LDADD = ../lib-src/libTOPCOM.a \
                   ../lib-src-reg/libCHECKREG.a \
-                  ../external/lib/libcddgmp.a \
-                  ../external/lib/libgmpxx.a \
-                  ../external/lib/libgmp.a
 
 AM_CPPFLAGS = -I../lib-src -I../lib-src-reg -I../wrap-gmp-gmpxx \
 	-I../external/include -I$(includedir) -DVERBOSE -DGMPRATIONAL \
diff -U 3 -dHrN topcom-0.17.7.orig/src-reg/Makefile.in topcom-0.17.7/src-reg/Makefile.in
--- topcom-0.17.7.orig/src-reg/Makefile.in	2016-07-08 12:46:13.000000000 +0200
+++ topcom-0.17.7/src-reg/Makefile.in	2016-09-25 20:19:04.062645737 +0200
@@ -102,8 +102,7 @@
 checkregularity_OBJECTS = $(am_checkregularity_OBJECTS)
 checkregularity_LDADD = $(LDADD)
 checkregularity_DEPENDENCIES = ../lib-src-reg/libCHECKREG.a \
-	../lib-src/libTOPCOM.a ../external/lib/libcddgmp.a \
-	../external/lib/libgmpxx.a ../external/lib/libgmp.a
+	../lib-src/libTOPCOM.a
 AM_V_P = $(am__v_P_@AM_V@)
 am__v_P_ = $(am__v_P_@AM_DEFAULT_V@)
 am__v_P_0 = false
@@ -257,9 +256,6 @@
 checkregularity_SOURCES = checkregularity.cc
 LDADD = ../lib-src-reg/libCHECKREG.a \
                   ../lib-src/libTOPCOM.a \
-                  ../external/lib/libcddgmp.a \
-                  ../external/lib/libgmpxx.a \
-                  ../external/lib/libgmp.a
 
 AM_CPPFLAGS = -I../lib-src -I../lib-src-reg -I../wrap-gmp-gmpxx \
 	-I../external/include -I$(includedir) -DVERBOSE -DGMPRATIONAL \