| DEFINED_PHASES=configure install postinst prepare setup |
| DEPEND=>=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),python_single_target_python2_7(+)] dev-libs/boost:= sci-biology/samtools:0.1-legacy sci-biology/bowtie:2 virtual/pkgconfig sci-biology/seqan:1.4 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.15:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 |
| DESCRIPTION=Python-based splice junction mapper for RNA-Seq reads using bowtie2 |
| EAPI=6 |
| HOMEPAGE=https://ccb.jhu.edu/software/tophat/ |
| IUSE=debug python_targets_python2_7 |
| KEYWORDS=~amd64 ~x86 |
| LICENSE=Artistic |
| RDEPEND=>=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),python_single_target_python2_7(+)] dev-libs/boost:= sci-biology/samtools:0.1-legacy sci-biology/bowtie:2 |
| REQUIRED_USE=python_targets_python2_7 |
| SLOT=0 |
| SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz |
| _eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 |
| _md5_=b4d49e6fdb4106d0eaa41fd94e15407d |
