| # Copyright 1999-2009 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-1.83-r2.ebuild,v 1.4 2009/08/18 17:24:32 weaver Exp $ |
| |
| inherit toolchain-funcs |
| |
| DESCRIPTION="General purpose multiple alignment program for DNA and proteins" |
| HOMEPAGE="http://www.embl-heidelberg.de/~seqanal/" |
| SRC_URI="ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/${PN}${PV}.UNIX.tar.gz" |
| |
| LICENSE="clustalw" |
| SLOT="1" |
| KEYWORDS="alpha amd64 ppc ppc64 sparc x86" |
| IUSE="" |
| |
| S="${WORKDIR}"/${PN}${PV} |
| |
| src_unpack() { |
| unpack ${A} |
| cd "${S}" |
| sed -i -e "s/CC = cc/CC = $(tc-getCC)/" \ |
| -e "s/CFLAGS = -c -O/CFLAGS = -c ${CFLAGS}/" \ |
| -e "s/LFLAGS = -O -lm/LFLAGS = -lm ${CFLAGS}/" makefile || die |
| sed -i -e "s%clustalw_help%/usr/share/doc/${PF}/clustalw_help%" clustalw.c || die |
| } |
| |
| src_compile() { |
| emake || die |
| } |
| |
| src_install() { |
| dobin clustalw || die |
| dodoc README clustalv.doc clustalw.doc clustalw.ms |
| insinto /usr/share/doc/${PF} |
| doins clustalw_help |
| } |